FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009600

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009600
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences475440
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTGGAT4600.006238159710.991967
CTTCAAT7350.00191803678.9474481
CAAAAGG6700.00906691058.7248751
GATATTC8558.8605325E-48.4482895
CGAGGGG1650.0043581598.174597140-144
Produced by FastQC (version 0.11.5)