FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009603

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009603
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1182313
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAAATGG11002.2923318E-47.60503961
CGAAAAT13805.522256E-57.07231951
CACGGAA12006.225959E-46.9712871
CTTTAAT14006.6722336E-56.9712861
CAGAAAT23001.583503E-76.3650881
CCTCCAT12650.0082221756.0619891
AATTTCA21207.241699E-55.58592655
CTTCCAT22151.3867723E-45.35042331
ATTTCCC19050.00349339475.11913826
Produced by FastQC (version 0.11.5)