FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009604

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009604
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences960413
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGCGT4907.70667E-411.7477121
ATAAGGG5250.001415469110.9245633
GCGTTCG4800.00907566510.4524276
CCCAAAA9400.00235110457.65475941
CTTCAAT13200.0012828636.541341
CTTTTGA15700.0088895445.49972531
Produced by FastQC (version 0.11.5)