FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009614

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009614
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences574930
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCTG3250.00859932513.2354844
CTTCGGA5650.002552891810.1758891
CTTGACC5750.00300858949.9763043
ACGTTAA1150.00301918979.97456830-34
GGAGAAT7650.0032071088.45496751
CTTTTCT12851.4287809E-57.82989171
Produced by FastQC (version 0.11.5)