FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009615

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009615
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences984313
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCATGG5750.0030456479.9628521
CATGCCC8950.00167687057.92244967
GTTCCAT14204.3137412E-46.5556611
CTTCCGC15150.0063275315.671921
CAAATAT18250.008586665.10084341
Produced by FastQC (version 0.11.5)