FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009618

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009618
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences620712
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCACTT2751.2402603E-418.4564191
CTCAAAT5208.455785E-512.5493511
CTCAAGG5300.001392865610.9445081
CTTCATT10457.987488E-58.3262031
ATCAAGG7850.0037382588.3129451
GCAGATT8950.00139370358.0713522
CTTTAAT11001.451026E-47.9098941
TCCGTTT8350.0067349867.7861962
CTTTGAT10250.00507551347.0738891
CTTTGAA10350.0055773737.0055421
CTGGAAA10350.0055773737.0055421
CTTTTTC25801.3730579E-45.0586531
Produced by FastQC (version 0.11.5)