FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009624

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009624
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences535982
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTTAAC2609.56799E-519.0906731
GTCACAA2650.00649109118.755795145
CAATTAT4908.703202E-411.5768521
GAATTTC7450.00297732568.5245384
Produced by FastQC (version 0.11.5)