FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009626

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009626
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences590150
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGTGG4051.5099563E-414.2466891
GATCGAA4000.002283581512.5746245
GTTGAAT6000.00407689069.6165151
CCATGAT8350.00683051077.77382951
CACAAAA8550.0084413997.5919851
Produced by FastQC (version 0.11.5)