FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009629

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009629
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences429825
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCGGA4600.007115678410.7986481
CTTTCAA7251.716345E-510.7667311
TTCCATT7600.00354646828.3604052
CAAAAAA10200.0059566756.95711231
Produced by FastQC (version 0.11.5)