FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009633

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009633
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences586361
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTACAT3850.00191288412.8745191
TGAAACG4757.109146E-411.8597683
GAATGCG4600.007540766610.7156874
ATGGAGT4750.00941632110.39946652
CGCTGGA7950.00518541468.016211
Produced by FastQC (version 0.11.5)