FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009636

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009636
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences564698
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGAGC450.00988439848.0241471
CATAGAT4700.00747199810.7287991
CATCCAC7300.00205345618.8811781
CTTCAAT8900.00135525218.0939571
CTTTCAT11400.00196302856.95086341
TCACTAC2700.00142998056.4799547115-119
CAAAAAG15250.00635778445.6684241
Produced by FastQC (version 0.11.5)