FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009638

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009638
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences682459
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCCTAC2853.1613308E-722.588259
TTCCCTA3601.3540557E-719.8692918
CACTCTT5052.7186434E-715.5840992
ACACTCT3254.754177E-415.4777841
ACTCTTT7109.479154E-712.0894853
CTTTCCC8751.2416556E-48.9922746
TTTCCCT8559.777425E-48.3660187
TTGTTGC8500.0086286757.57370669
CCCTACA2702.3619522E-46.88852610-14
CTCTTTC11950.00347268056.58430054
TCTTTCC13250.0014299736.4781395
Produced by FastQC (version 0.11.5)