FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009647

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009647
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences446263
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT1600.002341526622.3673557
ACACGTC2000.00851656617.8938858
CTTTGTT5802.2170082E-411.3145041
CCACAAT4750.00738192410.745471
AATATTC8300.0069241217.7612035
ATATTCA10200.00548088367.0172096
Produced by FastQC (version 0.11.5)