FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009651

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009651
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1713124
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGGGG1900.00191660548.951705140-144
CCCCGAA10401.3638317E-47.95439531
AATTAGT8300.00976857.4704146
CACACAA9650.0046223297.1438441
GTAGGAA11300.00285054026.7107881
GTTCCCG15550.00203863555.76331331
GTTTTAA18950.00372642935.0930521
Produced by FastQC (version 0.11.5)