FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009660

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009660
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1540610
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTTAACG7101.2666855E-511.0708067
CCTCGAT11450.00212846936.89957431
CTCCAAT14304.5391702E-46.52893641
CAAAGTT16850.0032528465.54087731
CACAAAA22951.5127771E-45.3198741
CCACAAA18350.0088537425.08794451
Produced by FastQC (version 0.11.5)