FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009665

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009665
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences543501
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCACGA2050.00919369417.6586171
CCCGAAC3656.0221588E-515.86856651
AGTCTTT6900.00122278139.4009514
ATCCATT7753.389198E-49.3032892
CCAAAAT7050.00142790989.2425961
Produced by FastQC (version 0.11.5)