FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009684

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009684
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1581660
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT6304.3898784E-511.3897717
CACGTCT6405.1543408E-511.2118059
ACACGTC6204.781075E-410.416138
GAGCACA10601.1171829E-58.8007664
ACTCACC6600.0093219828.6976436
GCACACG11152.1144278E-58.3661186
AGCACAC11904.0675062E-47.23585465
AGAGCAC12456.815231E-46.91663553
CAAAGAT22301.4996576E-55.81786061
CCATATT19650.00354169125.113812
AGTCACT4557.5470586E-45.055398520-24
Produced by FastQC (version 0.11.5)