FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009688

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009688
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences563230
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTGTTA3609.771142E-414.073931
CTGGCGA4904.9241302E-513.2943231
CGAGAAT5100.001024538811.3537591
TCCATTT8350.00689607537.7654292
CTTTTTT19800.00349332185.11779261
Produced by FastQC (version 0.11.5)