FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009696

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009696
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences678112
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT2253.2888354E-521.933319
CACACGT2701.3364831E-418.277767
ACACGTC2751.5381222E-417.9454368
GCACACG3755.0375256E-616.9199836
AGCACAC3606.722641E-515.666655
GAGCACA3700.001466308613.3378244
AGAGCAC4250.004150100511.6108963
Produced by FastQC (version 0.11.5)