FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009700

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009700
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1184496
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCGAG5100.001195213211.1484371
CCCGAAT6350.00734662128.9538611
CTCAAAT10409.912343E-68.883911
CTTTCGG13452.4394403E-46.8693431
CCTGCCC12650.00673220456.1801111
TTGGTTT14550.0045860785.8392789
ACAATAT22551.4387204E-45.33734133
Produced by FastQC (version 0.11.5)