FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009704

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009704
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences742017
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT3053.7815812E-415.9509367
ACACGTC3306.879862E-414.7425328
AGAGCAC4500.007062858410.8111913
GAGCACA4550.00766684910.6923854
GCACACG4600.00831445410.5761636
GACTTTT8107.608346E-48.5803094
CTTGTAT7500.0034990898.3744841
CTGTAAA11000.00188379636.97873641
ACTTTCT12700.00122624226.5669776
CAATAAT12350.0063330846.21587851
GTTTCTT15950.00237837715.6879991
Produced by FastQC (version 0.11.5)