FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009706

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009706
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences639409
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTGAGCT3150.00654408113.7937951
CTCAAAC5259.355904E-512.4144141
CAATAGT6250.00552111269.269431
CTCAAAA7700.0031760118.4643741
TCAATAT14506.736776E-56.9646783
ATTTAAT13850.00204923056.2744341
CTTTCTT15750.0085670165.5175171
Produced by FastQC (version 0.11.5)