FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009716

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009716
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences683449
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGACTGC5400.001947954112.842746145
CGAAAAT7451.7739112E-611.4772611
GTCAAAA7100.00176232399.032281
GGAACTT8951.654966E-48.7575551
TGGGATT6500.009399038.6876142
TAAATCC7350.00262864668.64329053
CAAAAAT14055.2313193E-57.10010771
AAAATAC12900.00123662016.5618975
CAAAAAA18200.0087977635.0896181
Produced by FastQC (version 0.11.5)