FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009723

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009723
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences834639
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGAGTG5550.002643414510.1342397
TTAAACT6559.5066056E-49.6644582
TTGCGAT6800.00134414619.30524358
CACAAAA10800.00137166187.1914151
CTCAAAA10600.0090918726.6610011
CAAATAT14200.00360234065.96675541
ATCAGGA15500.00950129055.4663181
Produced by FastQC (version 0.11.5)