FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009727

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009727
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1556565
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAACCT6608.0711854E-49.8396738
CTTCAGT8200.0056648177.93937441
CTCAAAT11602.7639465E-47.4830881
CTTCTAT17309.509683E-56.27195261
CTCAAAA20459.211411E-45.30585771
CTTTAAA24203.0001448E-45.0814911
CTTTTGT27055.5331926E-55.0809391
Produced by FastQC (version 0.11.5)