FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009732

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009732
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1022011
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCCCC1654.566119E-59.857264110-114
CCCTGTT9052.0045523E-59.3676241
CCAATCC10451.0834132E-48.1126321
CAAAGAT17402.040016E-56.4963221
CAATATT18700.0023915835.2764364
AGAATTT17900.0082484865.1185214
Produced by FastQC (version 0.11.5)