FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009733

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009733
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences545111
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCTACT1750.003368737621.0093691
TACTGCT6154.2341324E-410.55162053
TAAGTTT7351.9893743E-49.8098973
CTTCAAC6150.004259799.5652411
AGTTTTA7350.00216634398.8289085
CTTCAAT9850.00300049067.46525761
CTGCATT9950.0033119917.390231
AAAATTT13600.00175190266.36200673
CTTCTTT19150.00188594165.3757651
Produced by FastQC (version 0.11.5)