FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009735

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009735
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4386006
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGCAG26005.48762E-65.52781771
CTAAAAC24959.4132345E-55.1844061
CTCGTAC18300.0085277075.1049241
GTTTAAA32902.3785942E-65.0237611
GTCAGAG21500.00195947625.01360231
Produced by FastQC (version 0.11.5)