FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009736

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009736
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences592223
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAGGA3150.00742124613.533881
CTCACGC3800.001689626413.0886861
TAATACG3250.00928827113.0820139
TCATGTT4550.00662765210.9035192
CTTTTTT19704.5167326E-87.21348951
CAAATAT10450.00744826166.7993181
CAAAAAT11950.00372236646.5404321
AAAATAT21955.530479E-45.1656953
Produced by FastQC (version 0.11.5)