FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009742

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009742
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4547824
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAACAT13451.9300521E-47.00299361
CGACGAT26506.638187E-65.468231
CTCCCAT45452.910383E-115.42010451
GGCCAAT26353.5023964E-55.22439051
CTCAACC22254.932797E-45.21017841
GTTGGGA23652.0834892E-45.2081131
TTTAACG28602.617521E-55.05362567
Produced by FastQC (version 0.11.5)