FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009753

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009753
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences773889
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGGTT6250.0062834269.1252381
CAACAAA11855.553302E-79.0241671
CCTCGGC11854.1673295E-47.21933361
GTTTTAT12100.0040991996.48099331
GGTAGGT3350.0016779285.858607120-124
Produced by FastQC (version 0.11.5)