FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009767

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009767
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences945237
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACTTGC6506.6182685E-510.93870456
CCTGTTA6150.00562658449.2489858
GTTTTGA12257.418451E-57.56508451
AACGAAA12205.8238214E-47.01177451
CAAACTG11450.00229958726.84847261
CACAGCA10600.0082917086.72512961
ATCCAGA16550.00295727685.5850186
CTTCAAA16950.00380407745.46739151
Produced by FastQC (version 0.11.5)