FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009769

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009769
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences748420
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCGAG3950.001981937312.8147171
AGCGACC4750.00799073810.6329556
GTCCAGG4900.00989807810.3302311
CAAACTC6600.0089017848.745724
CTTCAAG9302.1388747E-48.5529871
CACAGAA8650.009155817.52375171
CTTTGAA9850.00353809177.3412811
AAATATT18550.0094966915.05648764
Produced by FastQC (version 0.11.5)