FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009777

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009777
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences488408
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTAAAC951.0771745E-437.8569451
CTACGAT3100.00615354513.9215861
CTTTAAC4650.006976417310.82791
CTTTGAT7351.7211572E-510.7647651
CTATAAT5500.002026202210.4622831
CTTTGTT7650.00318080688.4621411
ATCAAAT8250.0062784827.8467121
TTCCATT10000.00450110857.16112042
CTTTTTA10100.0047500117.12160351
GGTGTGC4000.00459757875.0079675-79
Produced by FastQC (version 0.11.5)