FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009781

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009781
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3522389
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTAAAC8700.00104577538.3115831
CCCCAAC12950.00718510856.1422271
CTCCAGT22753.0659758E-66.0391411
CTCGGAT15950.00156233695.89366771
CCTAAAT17206.0044066E-45.8857611
CTCCGAA25001.5070482E-55.4956191
CTCAGAT24255.4416836E-55.36739731
CTCAACG17850.00592580255.26633021
CTCTGGA37203.1346644E-85.24836251
CTTCGAT33355.022921E-75.20377351
Produced by FastQC (version 0.11.5)