FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009783

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009783
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1232533
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCCCC1200.00449257539.5066730-34
GTTTTAT22601.202352E-97.29169371
CTTCGAA10400.00657043236.88930941
GTTTCAT19106.484314E-56.0019951
CTTCAAT20802.2131557E-45.5114481
CTTTTAC20058.0303807E-45.3602611
Produced by FastQC (version 0.11.5)