FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009788

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009788
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences723948
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTAACG3150.00661762713.7708937
CATAGAT5501.4205252E-411.871481
CCTCAAT5400.001620868210.7478411
CTAAAAT6950.00123126499.3946961
CAACGAA6200.00509310479.3610231
CTCCTCT6400.0066129949.0684911
AGTAAAT7700.00312574358.4796291
CTCCCAT7750.00331411188.4249211
CTTTATT16951.7020284E-88.1322161
ATCAGAT12558.04741E-57.51492451
CTTTAAA14908.9361696E-56.8165841
TCTCTTC10900.0094682326.632775
CTTTCTT22352.1263695E-66.16738561
CTTTCAT15359.44576E-46.14412451
Produced by FastQC (version 0.11.5)