FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009792

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009792
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1523092
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCGAT11250.00167527337.05779741
CTACAAT14003.296526E-46.7026161
CCCGCCT12000.00330518126.61668541
CCCAGCT12500.0050636846.35201841
GTTTCAT21302.796104E-45.42212341
AAGTTTT19200.00254172535.2513494
ATCAGAA26303.6020778E-55.2146711
TCATTCA18300.008302865.11606844
Produced by FastQC (version 0.11.5)