FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009799

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009799
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1715605
Sequences flagged as poor quality0
Sequence length100-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT5450.00208228210.4307787
CACGTCT7653.4530932E-49.2885759
AGCACAC10106.285867E-47.73917255
AGAGCAC11202.2609498E-47.6146463
CCCTTGT14650.00448868945.85094171
Produced by FastQC (version 0.11.5)