FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009803

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009803
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences734058
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT2308.3506E-418.778479
CACACGT2450.001276167617.6287677
ACACGTC2600.001899692216.6117218
CTCTTCG6850.00110526779.5063331
CTTCGCC7100.00153326839.1716031
CTCATCC10306.378864E-47.72711
Produced by FastQC (version 0.11.5)