FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009804

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009804
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2177922
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGGAT16052.7829106E-46.24823141
GTCTATT15250.00679059755.6365781
ATCACGC17950.00120606885.5717237
CTCCAGA16800.00324068855.54291441
AATTTCG19500.00341259065.12931355
GTCTTGA18300.0088461025.08857731
Produced by FastQC (version 0.11.5)