FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009810

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009810
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences938396
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTTAC4850.00910426310.4479441
CTCACAG5650.002406449510.2498161
CCCCAGA6550.00832583858.8178822
TTGGATG8250.0060858827.87555179
CGAAACG9350.00210291387.74217271
GATCTTC12850.006730986.1799085
Produced by FastQC (version 0.11.5)