FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009815

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009815
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2868480
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTCAAA32801.8189894E-126.5369421
CTCATGA13300.00218572936.24045661
GTTTAAT23552.8774957E-76.16758541
CACGCAT14900.00117686066.03453541
GTCCAAA18850.00335133055.13692761
CTCTGAT20350.00156950995.09816171
Produced by FastQC (version 0.11.5)