FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009824

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009824
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1096456
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGTAAC5200.001282261111.0549077
TTCCGCG6204.7167798E-410.43084056
GTGACGG8609.546794E-48.3871981
CCCATGA8300.00647668177.8213151
CTCGCCG9800.00345338497.36019471
CTTGGAA13351.8562707E-47.0238861
CTTCGAA10850.0092712546.6479181
CTTTGGT12900.0070735636.15061241
CCAAAGA16100.00179669965.8241541
CTCCAGC14950.00504067175.78969141
CTTGAAG22258.8783825E-55.51104931
Produced by FastQC (version 0.11.5)