FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009827

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009827
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4446833
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT14006.0700386E-67.63795147
CACGAAT28408.642364E-75.5351581
AATTTAG25953.550965E-55.22004035
Produced by FastQC (version 0.11.5)