FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009837

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009837
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences955377
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTTGAC7650.00300639548.516771
GTTTGAA11200.00154813757.10998251
TCAATTT13602.3011165E-46.90176062
CTTCTTT29903.054156E-75.56865741
CTTGAAA18700.00170693595.41976261
ACAATAT20700.00110860515.2321043
Produced by FastQC (version 0.11.5)