FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009841

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009841
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1091720
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCACAT6150.0045179389.4988841
CCCGGAT12450.00430103676.45180231
CTTCAAT13400.0092306255.99439861
CTCCAGC21654.8672948E-55.7338821
CAAGAAA17250.00352352955.50315761
Produced by FastQC (version 0.11.5)