FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009842

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009842
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences831820
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAGCT6558.689731E-49.7596511
CTTAAAG7650.0035693648.3563031
CTTAAAT8100.0059710777.8920631
CAAATTC12609.3716686E-46.7247723
CTTTTAA14000.00287636676.08816341
TCCATTT12850.0084652016.0444452
CAAAGAA18202.4389155E-45.85400341
AATATTC19600.00420482835.0429735
Produced by FastQC (version 0.11.5)