FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009845

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009845
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1213983
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGGAA10609.1774354E-47.4692131
CTTAAAA13450.00158147086.42165571
CTTCTGG15750.00489617846.371977145
CAATTAT15108.5408567E-46.1966141
AAGGTCA14700.00451706635.847284
Produced by FastQC (version 0.11.5)