FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005009849

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005009849
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1769788
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAATT10250.00518050327.06059171
CTACCAG12700.0058142266.26835971
CTCCAAA21155.967613E-66.15923931
CCTCAAT14350.00308047336.05193571
CCCTGCT17356.631307E-45.83973931
CTTTAAT27101.6859649E-65.608091
AGATTCC18200.00125629875.55363376
CTTCTAC19900.0037414575.09143161
TTTCGCC20050.00423855665.04063377
Produced by FastQC (version 0.11.5)